- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | droGri2-6 | mir-34 | lgi-miR-34 | 22/23 | scaffold_14624 | + | 8-30 | N/A | 0.997398 | Paralog | 45/67 | 2/144 |
2 | droGri2-6 | mir-34 | dme-miR-34 | 24/24 | scaffold_14624 | + | 8-31 | N/A | 0.996152 | Paralog | 45/67 | 2/144 |
3 | droGri2-6 | mir-34 | spu-miR-34 | 20/22 | scaffold_14624 | + | 9-29 | N/A | 0.993403 | Paralog | 45/67 | 2/144 |
4 | droGri2-6 | mir-34 | aga-miR-34 | 20/20 | scaffold_14624 | + | 10-29 | N/A | 0.99727 | Paralog | 45/67 | 2/144 |
5 | droGri2-6 | mir-34 | ame-miR-34 | 21/22 | scaffold_14624 | + | 10-31 | N/A | 0.997773 | Paralog | 45/67 | 2/144 |
6 | droGri2-2 | mir-317 | dmo-miR-317 | 23/24 | scaffold_14624 | + | 49-71 | N/A | 0.903853 | Paralog | 18/19 | 2/32 |
7 | droGri2-2 | mir-317 | dgr-miR-317 | 24/24 | scaffold_14624 | + | 49-72 | N/A | 0.944082 | Paralog | 18/19 | 2/32 |
8 | droGri2-5 | mir-277 | dsi-miR-277 | 21/23 | scaffold_14624 | + | 50-72 | N/A | 0.927426 | Paralog | 17/17 | 2/32 |
9 | droGri2-2 | mir-317 | dps-miR-317 | 22/24 | scaffold_14624 | + | 51-72 | N/A | 0.931909 | Paralog | 18/19 | 2/32 |
10 | droGri2-2 | mir-317 | bmo-miR-317 | 22/22 | scaffold_14624 | + | 51-72 | N/A | 0.946612 | Paralog | 18/19 | 2/32 |
11 | droGri2-27 | mir-12 | cap-miR-12 | 21/22 | scaffold_14853 | - | 10-30 | N/A | 0.998749 | Paralog | 18/18 | 2/28 |
12 | droGri2-27 | mir-12 | bmo-miR-12 | 22/23 | scaffold_14853 | - | 12-34 | N/A | 0.999095 | Paralog | 18/18 | 2/28 |
13 | droGri2-34 | mir-10 | cap-miR-10a | 20/22 | scaffold_14906 | + | 8-29 | N/A | 0.994938 | Paralog | 43/59 | 2/124 |
14 | droGri2-34 | mir-10 | spu-miR-10 | 21/23 | scaffold_14906 | + | 9-29 | N/A | 0.995338 | Paralog | 43/59 | 2/124 |
15 | droGri2-37 | mir-iab-4 | dgr-miR-iab-4-5p | 22/22 | scaffold_14906 | + | 16-37 | N/A | 0.999388 | Paralog | 16/16 | 3/44 |
16 | droGri2-34 | mir-10 | lmi-miR-10* | 22/22 | scaffold_14906 | + | 50-71 | N/A | 0.998222 | Paralog | 43/59 | 2/124 |
17 | droGri2-35 | mir-11 | aga-miR-11 | 22/22 | scaffold_14906 | + | 51-72 | N/A | 0.99767 | Paralog | 13/13 | 2/19 |
18 | droGri2-32 | mir-92 | ame-miR-92a | 21/21 | scaffold_14906 | + | 51-71 | N/A | 0.843899 | Paralog | 47/65 | 3/170 |
19 | droGri2-35 | mir-11 | dgr-miR-11 | 21/21 | scaffold_14906 | + | 51-71 | N/A | 0.996665 | Paralog | 13/13 | 2/19 |
20 | droGri2-49 | mir-iab-4 | dme-miR-iab-4as-5p | 23/23 | scaffold_14906 | - | 16-38 | N/A | 0.994338 | Paralog | 16/16 | 3/44 |
21 | droGri2-41 | mir-13 | dgr-miR-13b | 22/22 | scaffold_14906 | - | 49-70 | N/A | 0.872964 | Paralog | 17/18 | 4/75 |
22 | droGri2-49 | mir-iab-4 | dme-miR-iab-4as-3p | 21/22 | scaffold_14906 | - | 49-70 | N/A | 0.998832 | Paralog | 16/16 | 3/44 |
23 | droGri2-41 | mir-13 | ame-miR-13a | 20/21 | scaffold_14906 | - | 50-70 | N/A | 0.814357 | Paralog | 17/18 | 4/75 |
24 | droGri2-51 | mir-9 | dgr-miR-9c | 22/22 | scaffold_14978 | + | 6-27 | N/A | 0.975763 | Paralog | 41/59 | 7/206 |
25 | droGri2-55 | mir-9 | dgr-miR-9b | 23/23 | scaffold_14978 | + | 14-36 | N/A | 0.982601 | Paralog | 41/59 | 7/206 |
26 | droGri2-52 | mir-79 | bmo-miR-79 | 26/26 | scaffold_14978 | + | 49-74 | N/A | 0.982471 | Paralog | 22/28 | 2/45 |
27 | droGri2-52 | mir-79 | dgr-miR-79 | 22/22 | scaffold_14978 | + | 51-72 | N/A | 0.955971 | Paralog | 22/28 | 2/45 |
28 | droGri2-52 | mir-79 | cel-miR-79 | 20/22 | scaffold_14978 | + | 51-71 | N/A | 0.939548 | Paralog | 22/28 | 2/45 |
29 | droGri2-52 | mir-79 | ame-miR-79 | 21/21 | scaffold_14978 | + | 51-71 | N/A | 0.930464 | Paralog | 22/28 | 2/45 |
30 | droGri2-56 | mir-9 | ame-miR-9b | 23/23 | scaffold_14978 | - | 14-36 | N/A | 0.996033 | Paralog | 41/59 | 7/206 |
31 | droGri2-73 | mir-282 | dan-miR-282 | 27/28 | scaffold_15110 | + | 5-31 | N/A | 0.9869 | Paralog | 16/16 | 2/28 |
32 | droGri2-73 | mir-282 | tca-miR-282 | 23/24 | scaffold_15110 | + | 9-32 | N/A | 0.991876 | Paralog | 16/16 | 2/28 |
33 | droGri2-78 | mir-219 | odi-miR-219 | 19/21 | scaffold_15110 | + | 10-28 | N/A | 0.939164 | Paralog | 38/52 | 2/89 |
34 | droGri2-86 | mir-9 | xtr-miR-9 | 22/22 | scaffold_15110 | + | 11-32 | N/A | 0.991581 | Paralog | 41/59 | 7/206 |
35 | droGri2-78 | mir-219 | dre-miR-219 | 22/22 | scaffold_15110 | + | 11-32 | N/A | 0.957705 | Paralog | 38/52 | 2/89 |
36 | droGri2-78 | mir-219 | hsa-miR-219-5p | 21/21 | scaffold_15110 | + | 11-31 | N/A | 0.947668 | Paralog | 38/52 | 2/89 |
37 | droGri2-86 | mir-9 | sko-miR-9 | 21/21 | scaffold_15110 | + | 11-31 | N/A | 0.991864 | Paralog | 41/59 | 7/206 |
38 | droGri2-78 | mir-219 | spu-miR-219 | 22/23 | scaffold_15110 | + | 12-34 | N/A | 0.963229 | Paralog | 38/52 | 2/89 |
39 | droGri2-86 | mir-9 | dgr-miR-9a | 23/23 | scaffold_15110 | + | 12-34 | N/A | 0.993594 | Paralog | 41/59 | 7/206 |
40 | droGri2-86 | mir-9 | lmi-miR-9a* | 22/23 | scaffold_15110 | + | 50-72 | N/A | 0.997225 | Paralog | 41/59 | 7/206 |
41 | droGri2-108 | mir-33 | dgr-miR-33 | 21/21 | scaffold_15110 | - | 8-28 | N/A | 0.923379 | Paralog | 34/54 | 2/96 |
42 | droGri2-98 | mir-276 | dgr-miR-276b* | 23/23 | scaffold_15110 | - | 10-32 | N/A | 0.997495 | Paralog | 17/17 | 4/53 |
43 | droGri2-108 | mir-33 | mml-miR-33a | 18/19 | scaffold_15110 | - | 11-29 | N/A | 0.961406 | Paralog | 34/54 | 2/96 |
44 | droGri2-98 | mir-276 | aga-miR-276-5p | 20/20 | scaffold_15110 | - | 11-30 | N/A | 0.998977 | Paralog | 17/17 | 4/53 |
45 | droGri2-112 | mir-315 | sko-miR-315 | 21/21 | scaffold_15110 | - | 12-32 | N/A | 0.99701 | Paralog | 18/21 | 2/35 |
46 | droGri2-112 | mir-315 | cap-miR-315 | 23/23 | scaffold_15110 | - | 12-34 | N/A | 0.99474 | Paralog | 18/21 | 2/35 |
47 | droGri2-112 | mir-315 | dgr-miR-315 | 22/22 | scaffold_15110 | - | 12-33 | N/A | 0.996204 | Paralog | 18/21 | 2/35 |
48 | droGri2-98 | mir-276 | dgr-miR-276a* | 22/23 | scaffold_15110 | - | 12-33 | N/A | 0.996329 | Paralog | 17/17 | 4/53 |
49 | droGri2-98 | mir-276 | tca-miR-276* | 20/20 | scaffold_15110 | - | 13-32 | N/A | 0.998316 | Paralog | 17/17 | 4/53 |
50 | droGri2-96 | mir-276 | dgr-miR-276a* | 23/23 | scaffold_15110 | - | 14-36 | N/A | 0.894751 | Paralog | 17/17 | 4/53 |
51 | droGri2-93 | mir-316 | dmo-miR-316 | 21/22 | scaffold_15110 | - | 14-35 | N/A | 0.945666 | Paralog | 13/14 | 2/22 |
52 | droGri2-96 | mir-276 | aga-miR-276-5p | 20/20 | scaffold_15110 | - | 15-34 | N/A | 0.979296 | Paralog | 17/17 | 4/53 |
53 | droGri2-96 | mir-276 | bmo-miR-276 | 22/22 | scaffold_15110 | - | 15-36 | N/A | 0.939794 | Paralog | 17/17 | 4/53 |
54 | droGri2-96 | mir-276 | tca-miR-276* | 20/20 | scaffold_15110 | - | 16-35 | N/A | 0.943702 | Paralog | 17/17 | 4/53 |
55 | droGri2-94 | mir-314 | dgr-miR-314 | 21/21 | scaffold_15110 | - | 48-68 | N/A | 0.95462 | Paralog | 12/12 | 2/13 |
56 | droGri2-98 | mir-276 | dgr-miR-276b | 22/22 | scaffold_15110 | - | 49-70 | N/A | 0.999679 | Paralog | 17/17 | 4/53 |
57 | droGri2-96 | mir-276 | dgr-miR-276a | 22/22 | scaffold_15110 | - | 49-70 | N/A | 0.939433 | Paralog | 17/17 | 4/53 |
58 | droGri2-119 | mir-307 | lmi-miR-307* | 23/23 | scaffold_15112 | - | 9-31 | N/A | 0.880519 | Paralog | 16/17 | 2/26 |
59 | droGri2-120 | mir-5 | dgr-miR-5 | 23/23 | scaffold_15112 | - | 10-32 | N/A | 0.984514 | Paralog | 12/12 | 4/23 |
60 | droGri2-126 | mir-305 | dgr-miR-305 | 23/23 | scaffold_15126 | + | 15-37 | N/A | 0.991494 | Paralog | 16/19 | 2/23 |
61 | droGri2-128 | mir-133 | spu-miR-133 | 22/23 | scaffold_15126 | + | 50-72 | N/A | 0.990968 | Paralog | 47/64 | 2/138 |
62 | droGri2-121 | mir-2 | dgr-miR-2a | 23/23 | scaffold_15126 | + | 50-72 | N/A | 0.918181 | Paralog | 20/21 | 6/116 |
63 | droGri2-125 | mir-275 | dgr-miR-275 | 23/23 | scaffold_15126 | + | 50-72 | N/A | 0.960841 | Paralog | 16/16 | 2/25 |
64 | droGri2-127 | mir-1 | cel-miR-1 | 19/21 | scaffold_15126 | + | 51-69 | N/A | 0.991204 | Paralog | 41/61 | 2/166 |
65 | droGri2-128 | mir-133 | cin-miR-133 | 21/21 | scaffold_15126 | + | 51-71 | N/A | 0.968194 | Paralog | 47/64 | 2/138 |
66 | droGri2-128 | mir-133 | dgr-miR-133 | 22/22 | scaffold_15126 | + | 51-72 | N/A | 0.984153 | Paralog | 47/64 | 2/138 |
67 | droGri2-122 | mir-2 | dgr-miR-2a | 23/23 | scaffold_15126 | + | 51-73 | N/A | 0.999493 | Paralog | 20/21 | 6/116 |
68 | droGri2-127 | mir-1 | cap-miR-1 | 21/22 | scaffold_15126 | + | 51-72 | N/A | 0.980973 | Paralog | 41/61 | 2/166 |
69 | droGri2-128 | mir-133 | bfl-miR-133 | 22/22 | scaffold_15126 | + | 51-72 | N/A | 0.963471 | Paralog | 47/64 | 2/138 |
70 | droGri2-128 | mir-133 | mmu-miR-133a | 22/22 | scaffold_15126 | + | 51-72 | N/A | 0.982155 | Paralog | 47/64 | 2/138 |
71 | droGri2-128 | mir-133 | sme-miR-133 | 18/20 | scaffold_15126 | + | 52-70 | N/A | 0.95393 | Paralog | 47/64 | 2/138 |
72 | droGri2-137 | mir-210 | lmi-miR-210* | 21/22 | scaffold_15203 | + | 9-30 | N/A | 0.941842 | Paralog | 33/43 | 2/62 |
73 | droGri2-137 | mir-210 | lmi-miR-210 | 23/23 | scaffold_15203 | + | 47-69 | N/A | 0.983482 | Paralog | 33/43 | 2/62 |
74 | droGri2-137 | mir-210 | aga-miR-210 | 20/21 | scaffold_15203 | + | 48-68 | N/A | 0.989207 | Paralog | 33/43 | 2/62 |
75 | droGri2-137 | mir-210 | dre-miR-210 | 20/22 | scaffold_15203 | + | 49-68 | N/A | 0.971929 | Paralog | 33/43 | 2/62 |
76 | droGri2-137 | mir-210 | bmo-miR-210 | 20/20 | scaffold_15203 | + | 52-71 | N/A | 0.986495 | Paralog | 33/43 | 2/62 |
77 | droGri2-155 | mir-7 | ssc-miR-7 | 21/21 | scaffold_15245 | + | 11-31 | N/A | 0.888803 | Paralog | 46/63 | 2/143 |
78 | droGri2-155 | mir-7 | gga-miR-7 | 22/22 | scaffold_15245 | + | 11-32 | N/A | 0.877439 | Paralog | 46/63 | 2/143 |
79 | droGri2-155 | mir-7 | cap-miR-7 | 23/24 | scaffold_15245 | + | 12-35 | N/A | 0.865904 | Paralog | 46/63 | 2/143 |
80 | droGri2-155 | mir-7 | dgr-miR-7 | 23/23 | scaffold_15245 | + | 12-34 | N/A | 0.846942 | Paralog | 46/63 | 2/143 |
81 | droGri2-161 | mir-8 | lmi-miR-8 | 22/23 | scaffold_15245 | - | 48-70 | N/A | 0.886025 | Paralog | 20/23 | 2/35 |
82 | droGri2-169 | mir-308 | aga-miR-308 | 21/22 | scaffold_15245 | - | 48-69 | N/A | 0.993649 | Paralog | 13/13 | 2/23 |
83 | droGri2-165 | mir-184 | dgr-miR-184 | 22/22 | scaffold_15245 | - | 48-69 | N/A | 0.983071 | Paralog | 40/54 | 2/73 |
84 | droGri2-165 | mir-184 | bmo-miR-184 | 24/24 | scaffold_15245 | - | 48-71 | N/A | 0.976018 | Paralog | 40/54 | 2/73 |
85 | droGri2-170 | mir-14 | dgr-miR-14 | 21/21 | scaffold_15245 | - | 50-70 | N/A | 0.994139 | Paralog | 16/16 | 2/29 |
86 | droGri2-165 | mir-184 | oan-miR-184 | 20/22 | scaffold_15245 | - | 50-70 | N/A | 0.988933 | Paralog | 40/54 | 2/73 |
87 | droGri2-165 | mir-184 | xtr-miR-184 | 20/22 | scaffold_15245 | - | 50-69 | N/A | 0.990985 | Paralog | 40/54 | 2/73 |
88 | droGri2-181 | let-7 | spu-let-7 | 20/22 | scaffold_15252 | + | 11-31 | N/A | 0.999523 | Paralog | 44/65 | 4/337 |
89 | droGri2-180 | mir-100 | mdo-miR-100 | 20/21 | scaffold_15252 | + | 11-31 | N/A | 0.901704 | Paralog | 39/56 | 2/88 |
90 | droGri2-180 | mir-100 | cap-miR-100 | 20/22 | scaffold_15252 | + | 11-32 | N/A | 0.869344 | Paralog | 39/56 | 2/88 |
91 | droGri2-180 | mir-100 | nve-miR-100 | 20/22 | scaffold_15252 | + | 12-32 | N/A | 0.84992 | Paralog | 39/56 | 2/88 |
92 | droGri2-187 | mir-124 | dgr-miR-124 | 23/23 | scaffold_15252 | + | 50-72 | N/A | 0.94296 | Paralog | 47/65 | 2/135 |
93 | droGri2-187 | mir-124 | gga-miR-124a | 21/22 | scaffold_15252 | + | 51-71 | N/A | 0.939571 | Paralog | 47/65 | 2/135 |
94 | droGri2-187 | mir-124 | odi-miR-124a | 21/22 | scaffold_15252 | + | 51-72 | N/A | 0.963266 | Paralog | 47/65 | 2/135 |
95 | droGri2-187 | mir-124 | sme-miR-124a | 19/21 | scaffold_15252 | + | 52-70 | N/A | 0.940678 | Paralog | 47/65 | 2/135 |
96 | droGri2-187 | mir-124 | mmu-miR-124 | 20/20 | scaffold_15252 | + | 52-71 | N/A | 0.894992 | Paralog | 47/65 | 2/135 |
97 | droGri2-202 | let-7 | spu-let-7 | 20/22 | scaffold_3792 | + | 11-31 | N/A | 0.999483 | Paralog | 44/65 | 4/337 |
98 | droGri2-203 | mir-5 | dgr-miR-5 | 23/23 | scaffold_5621 | + | 9-31 | N/A | 0.986645 | Paralog | 12/12 | 4/23 |
99 | droGri2-204 | mir-6 | dgr-miR-6 | 22/22 | scaffold_5621 | + | 51-72 | N/A | 0.822267 | Paralog | 12/12 | 7/55 |
Total | 99 record(s). |